Submission Details

Submitter:

Classification:
Definitive
GENCC:100001
Gene:
Disease:
ectodermal dysplasia and immunodeficiency 2
Mode Of Inheritance:
Autosomal dominant
Evaluated Date:
02/10/2025
Evidence/Notes:

NFKBIA was first reported in relation to autosomal-dominant anhidrotic ectodermal dysplasia with immune deficiency (AD-EDA-ID) in 2003 (Courtois et al., PMID: 14523047). NFKBIA is an inhibitor of NF-κB and encodes the protein IκBα. When the IκB kinase (IKK) complex phosphorylates IκBα at specific serine residues thereby promoting its ubiquitnation and degradation by the proteasome, the NF-κB complex is released and allowed to translocate into the nucleus and activate target genes. AD-EDA-ID is a form of ectodermal dysplasia, a group of conditions defined by abnormal development of ectodermal tissues including skin, hair, and sweat glands. Additionally, patients with EDA-ID often have reduced immune functions, with a combined T and B cell immunodeficiency alongside impaired monocyte and neutrophil responses to TLR stimulation, leading to susceptibility to bacterial, fungal, viral, and other opportunistic infections. Symptoms are evident soon after birth, with variable severity. 14 variants (11 missense and 3 nonsense) that have been reported in 18 probands in 16 publications (PMIDs: 23864385, 14523047, 23708964, 17931563, 22078572, 18412279, 23870671, 29948576, 35005117, 28417298, 28629746, 31683054, 32222431, 36292785, 15337789, 26691317) are included in this curation. Case-Level evidence supports this gene-disease relationship, with the majority of variants being de novo and having functional evidence. The mechanism of pathogenicity is reported to be gain of function due to increased resistance to degradation. This gene-disease relationship is also supported by mouse models, in vitro functional assays, expression studies, and biochemical function (PMIDs: 23864385, 14523047, 23708964, 25601653). A mouse model was made to be heterozygous for S32I mutation in NFKBIA (PMID: 25601653). This mouse has many features that reflect the presentation of EDA-ID seen in patients with NFKBIA mutations, including teeth and hair abnormalities and impaired immune responses. The in vitro functional assays and expression studies further support the role of NFKBIA mutations in the disease by demonstrating a connection to altered NF-kB signaling. More evidence is available in the literature, but the maximum score for experimental evidence (6 pts.) has been reached. In summary, there is definitive evidence supporting the relationship between NFKBIA and AD-EDA-ID. This has been repeatedly demonstrated in both the research and clinical diagnostic settings, and has been upheld over time. This classification was approved by the ClinGen SCID-CID GCEP on the meeting date January 16th, 2025 (SOP Version 11).

PubMed IDs:
14523047 15337789 17931563 18412279 22078572 23708964 23864385 23870671 25601653 26691317 28417298 28629746 29948576 31683054 32222431 35005117 36292785
Public Report:
Assertion Criteria:
Submitter Submitted Date:
12/05/2025

The GenCC data are available free of restriction under a CC0 1.0 Universal (CC0 1.0) Public Domain Dedication. The GenCC requests that you give attribution to GenCC and the contributing sources whenever possible and appropriate. The accepted Flagship manuscript is now available from Genetics in Medicine (https://www.gimjournal.org/article/S1098-3600(22)00746-8/fulltext).

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. The GenCC does not independently verify the submitted information. Though the information is obtained from sources believed to be reliable, no warranty, expressed or implied, is made regarding accuracy, adequacy, completeness, reliability or usefulness of any information. This disclaimer applies to both isolated and aggregate uses of the information. The information is provided on an "as is" basis, collected through periodic submission and therefore may not represent the most up-to-date information from the submitters. If you have questions about the medical relevance of information contained on this website, please see a healthcare professional; if you have questions about specific gene-disease claims, please contact the relevant sources; and if you have questions about the representation of the data on this website, please contact gencc@thegencc.org.