Submission Details

Submitter:

Classification:
Definitive
GENCC:100001
Gene:
Disease:
FNIP1-associated syndrome
Mode Of Inheritance:
Autosomal recessive
Evaluated Date:
11/26/2024
Evidence/Notes:

FNIP1 was first reported in relation to autosomal recessive FNIP1-associated syndrome in 2020 (Niehues T, et al., 2020, PMID: 32181500). Folliculin interacting protein 1 (FNIP1) encodes the FNIP1 protein, a regulator of adenosine monophosphate-activated protein (AMPK) and mammalian target of rapamycin (mTOR) cellular pathways. FNIP1 controls B cell development through regulation of mitochondrial autophagy (reviewed in PMID: 39013219). FNIP1 deficiency is associated with a syndromic disease that includes B cell immunodeficiency and cardiomyopathy. The latter is related to the important role of FNIP1 in controlling skeletal muscle functional angiogenesis, which is required for muscle revascularization during ischemia (PMID: 37932296). Seven variants (missense, nonsense, frameshift, and splice site) have been reported in seven probands, and one additional family member, in four publications (PMIDs: 32181500, 32905580, 37522988, 39537849). This gene-disease association is supported by its function in nutrient/energy sensing (PMID: 17028174), which is altered in patient cells (PMID: 32905580). Additionally, mouse models recapitulate the block at the pre-B-cell stage and dysregulation of metabolic regulators (PMIDs: 22608497, 22709692) as well as some key features of the disease (PMID: 27303042). In summary, there is definitive evidence to support the relationship between FNIP1 and autosomal recessive FNIP1-associated syndrome. This has been repeatedly demonstrated in both the research and clinical diagnostic settings, and has been upheld over time.

This gene-disease pair was originally evaluated by the Antibody Deficiencies GCEP on November, 16 2021. It was reevaluated on November 22, 2024. As a result of this reevaluation, the classification changed from Strong to Definitive due to the replication of this gene-disease relationship over time and two additional case reports (PMIDs: 37522988, 39537849).

PubMed IDs:
17028174 22608497 22709692 27303042 32181500 32905580 37522988 39537849
Public Report:
Assertion Criteria:
Submitter Submitted Date:
12/05/2025

The GenCC data are available free of restriction under a CC0 1.0 Universal (CC0 1.0) Public Domain Dedication. The GenCC requests that you give attribution to GenCC and the contributing sources whenever possible and appropriate. The accepted Flagship manuscript is now available from Genetics in Medicine (https://www.gimjournal.org/article/S1098-3600(22)00746-8/fulltext).

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. The GenCC does not independently verify the submitted information. Though the information is obtained from sources believed to be reliable, no warranty, expressed or implied, is made regarding accuracy, adequacy, completeness, reliability or usefulness of any information. This disclaimer applies to both isolated and aggregate uses of the information. The information is provided on an "as is" basis, collected through periodic submission and therefore may not represent the most up-to-date information from the submitters. If you have questions about the medical relevance of information contained on this website, please see a healthcare professional; if you have questions about specific gene-disease claims, please contact the relevant sources; and if you have questions about the representation of the data on this website, please contact gencc@thegencc.org.