Submission Details

Submitter:

Classification:
Definitive
GENCC:100001
Gene:
Disease:
bone marrow failure syndrome 4
Mode Of Inheritance:
Autosomal recessive
Evaluated Date:
06/07/2024
Evidence/Notes:

MYSM1 was first reported in relation to autosomal recessive bone marrow syndrome in 2013 (Alsultan et al., PMID: 24288411). Bone marrow failure due to MYSM1 deficiency is characterized by anemia, leukopenia, thrombocytopenia, and B cell deficiency resulting in recurrent infections and in some cases, non hematologic features such as dysmorphic features, skeletal abnormalities, and developmental delay. At least seven variants (e.g. missense, nonsense, frameshift, and canonical splice) that have been reported in seven probands in seven publications (PMIDs: 24288411, 28115216, 26220525, 33858043, 30735661, 32640305, 35295078) are included in this curation. MYSM1 variants segregated with disease in two families and heterozygous carriers were asymptomatic (PMIDs: 28115216, 24288411). More evidence is available in the literature, but the maximum score for genetic evidence (12 pts.) has been reached. The mechanism of pathogenicity is known to be loss of function. This gene-disease relationship is also supported by mouse models, in vivo genetic reversion in an affected patient, biochemical function, functional alteration, and protein interactions studies. (PMIDs: 26125289, 26474655, 22184403, 26220525, 28115216). In summary, there is definitive evidence supporting the relationship between MYSM1 and autosomal recessive bone marrow failure. This has been repeatedly demonstrated in both the research and clinical diagnostic settings, and has been upheld over time. This classification was approved by the ClinGen SCID-CID GCEP on June 7, 2024 (SOP Version 10).

PubMed IDs:
22184403 24288411 26125289 26220525 26474655 28115216 30735661 32640305 33858043 35295078
Public Report:
Assertion Criteria:
Submitter Submitted Date:
12/05/2025

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