Submission Details

Submitter:

Classification:
Definitive
GENCC:100001
Gene:
Disease:
hypertrophic cardiomyopathy
Mode Of Inheritance:
Semidominant
Evaluated Date:
08/09/2023
Evidence/Notes:

The CSRP3 gene has been associated with semidominant hypertrophic cardiomyopathy in 73 probands across 17 publications. Semidominance includes both dominant and recessive inheritance patterns where individuals with heterozygous variants have an intermediate phenotype and individuals with homozygous variants have a more severe phenotype and/or earlier onset. Twenty-five unique variants (16 missense, 4 frameshift, 2 nonsense, 2 canonical splice site, and 1 indel) that have been reported in humans (PMIDs: 16352453, 18505755, 15781201, 23396983, 26656175, 21425739, 12642359, 19035361, 25351510, 23861362, 20087448, 30012424, 34558151, 33035702, 31919335, 33012304, 37431535) are included in this curation. CSRP3 was first associated with this disease in humans in 2003 (Geier et al., PMID 12642359). This gene-disease relationship has been studied in at least 5 case-control studies (PMIDs: 23396983, 28082330, 27532257, 37431535) at the aggregate variant level and showed nominally significant case excess. More evidence is available in the literature, but the maximum score for genetic evidence (12 pts.) has been reached. The mechanism for disease is loss of function.

The gene-disease relationship is also supported by expression studies (Uhlén M, et al., 2015, PMID: 25613900), protein interaction with alpha-actinin (Knöll R, et al., 2002, PMID: 12507422), biochemical function (Hoffmann C, et al., 2014, PMID: 24934443), mouse models (Ehsan M, et al., 2018, PMID: 30048712, Arber S, et al., 1997, PMID: 9039266), a cell culture model (Li X, et al., 2019, PMID: 31406109), and a rescue model (Arber S, et al., 1997, PMID: 9039266). In summary, there is definitive evidence supporting the relationship between CSRP3 and semidominant hypertrophic cardiomyopathy. This has been repeatedly demonstrated in both the research and clinical diagnostic settings and has been upheld over time. This gene-disease pair was originally evaluated by the Hypertrophic Cardiomyopathy GCEP on December 19, 2017. It was re-evaluated on August 9, 2023 by the ClinGen Hereditary Cardiovascular Disease GCEP (SOP Version 9). As a result of this reevaluation, the classification increased from Moderate to Definitive with the addition of a new case-level and experimental data and the inclusion of recessive data given the change to a semidominant mode of inheritance.

PubMed IDs:
9039266 12507422 12642359 15205937 15582318 15781201 16352453 17097056 18083727 18505755 19035361 20044516 20087448 21425739 22421737 22429680 23396983 23861362 24934443 25351510 25613900 26656175 27532257 28082330 30012424 30048712 31406109 31919335 33012304 33035702 34558151 37431535
Public Report:
Assertion Criteria:
Submitter Submitted Date:
12/05/2025

The GenCC data are available free of restriction under a CC0 1.0 Universal (CC0 1.0) Public Domain Dedication. The GenCC requests that you give attribution to GenCC and the contributing sources whenever possible and appropriate. The accepted Flagship manuscript is now available from Genetics in Medicine (https://www.gimjournal.org/article/S1098-3600(22)00746-8/fulltext).

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. The GenCC does not independently verify the submitted information. Though the information is obtained from sources believed to be reliable, no warranty, expressed or implied, is made regarding accuracy, adequacy, completeness, reliability or usefulness of any information. This disclaimer applies to both isolated and aggregate uses of the information. The information is provided on an "as is" basis, collected through periodic submission and therefore may not represent the most up-to-date information from the submitters. If you have questions about the medical relevance of information contained on this website, please see a healthcare professional; if you have questions about specific gene-disease claims, please contact the relevant sources; and if you have questions about the representation of the data on this website, please contact gencc@thegencc.org.