Submission Details

Submitter:

Classification:
Definitive
GENCC:100001
Gene:
Disease:
Mendelian susceptibility to mycobacterial diseases due to partial STAT1 deficiency
Mode Of Inheritance:
Autosomal dominant
Evaluated Date:
11/20/2024
Evidence/Notes:

STAT1 was first reported in relation to Mendelian Susceptibility to Mycobacterial Disease (MSMD), autosomal dominant, in 2001 (Dupuis et al., PMID: 11452125). STAT1 is primarily activated by IFN in the response of the antimicrobial immune system. IFN-γ stimulation leads to STAT1 phosphorylation, inducing its homodimerization to form γ-activating factor (GAF), which is translocated to the nucleus, and binds to γ-activating sequences to induce transcription of target genes (PMID: 35456913).

MSMD is a primary immunodeficiency disease characterized by predisposition to clinical disease caused by weakly virulent mycobacteria such as non-tuberculous mycobacteria, Bacillus Calmette Guerin (BCG) and environmental mycobacteria, caused by a single gene mutation (PMID: 25453225). Genetic etiologies of MSMD are involved in the production or response to interferon-γ (IFN-γ).

6 missense variants that have been reported in 7 probands in 4 publications are included in this curation (PMIDs: 11452125, 16934001, 22573496, 36339330). Functional experiments demonstrated impaired phosphorylation, nuclear accumulation and GAF DNA binding activity of the mutant STAT1. Variants reported showed a dominant-negative effect on the gamma interferon activated sequence (GAS) activation, but not on the interferon-stimulated response element (ISRE) activation (PMID: 22573496).

Experimental evidence also supports this gene-disease relationship. Expression of STAT1 is widely enhanced in EBV transformed lymphocytes (PMID: 23715323). Defective GAF response which results in impaired mycobacterial immunity could be demonstrated in a mouse fibroblast cell line. Mutant cells showed defective STAT1 phosphorylation and nuclear accumulation upon stimulation by IFN-γ (PMID: 11452125).

In summary, STAT1 is definitively associated with Mendelian Susciptibility to Mycobacterial Disease (MSMD). This has been repeatedly demonstrated in both the research and clinical diagnostic settings, and has been upheld over time.

PubMed IDs:
11452125 16319195 16934001 22573496 23715323 36339330
Public Report:
Assertion Criteria:
Submitter Submitted Date:
12/05/2025

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